Namespace List

Here is a list of all documented namespaces with brief descriptions:
cctbxCommon cctbx namespace
cctbx::adptbxADP (anisotropic displacement parameters) Toolbox namespace
cctbx::crystalCrystal symmetry: unit cell + space group
cctbx::crystal::close_packingSampling of search spaces based on close sphere packings
cctbx::crystal::coordination_sequencesCoordination sequence algorithms
cctbx::crystal::direct_space_asuDirect-space asymmetric units
cctbx::crystal::neighborsNext neighbor algorithms
cctbx::dmtbxDirect methods toolbox
cctbx::eltbxElement Toolbox namespace
cctbx::eltbx::xray_scatteringX-ray scattering tables
cctbx::geometry_restraintsGeometry restraints (bond, angle, etc.)
cctbx::maptbxMap algorithms
cctbx::maptbx::structure_factorsCopy structure factors to and from complex maps
cctbx::millerMiller index namespace
cctbx::sgtbxSpace Group Toolbox namespace
cctbx::sgtbx::asuDirect space asymmetric unit classes
cctbx::sgtbx::lattice_symmetryDetermination of lattice symmetry (Bravais type)
cctbx::sgtbx::reference_settingsTables for the "reference settings" of the 230 crystallographic space groups
cctbx::sgtbx::reference_settings::normalizerTables for the Euclidean and affine normalizers
cctbx::sgtbx::reference_settings::wyckoffWyckoff tables
cctbx::sgtbx::tensor_rank_2Symmetry constraints for tensors of rank 2
cctbx::sgtbx::tensor_rank_2::cartesian_constraints_constantsOutside template class to avoid complications
cctbx::sgtbx::wyckoffWyckoff tables
cctbx::translation_searchTranslation searches
cctbx::uctbxUnit Cell Toolbox namespace
cctbx::xrayX-ray scatterer and structure factor namespace
cctbx::xray::targetsStructure-factor target functions
Distl::scitbxCommon scitbx namespace
gltbxCommon gltbx namespace
iotbxCommon iotbx namespace
iotbx::mtzC++ wrapper for CCP4 CMtz library
iotbx::pdbHandling of files in PDB format
iotbx::pdb::hierarchyHierarchy organizing PDB atom objects
iotbx::pdb::hybrid_36Hybrid-36 C++ wrappers
iotbx::pdb::rna_dna_atom_namesHighly optimized dictionary of RNA/DNA atom name aliases
iotbx::pdb::rna_dna_atom_names::info_flagsConstants
iotbx::pdb::utilsMiscellaneous algorithms
mmtbxCommon mmtbx namespace
mmtbx::alignmentSequence alignment tools
mmtbx::masksMasks for bulk solvent modelling
scitbxConversion of versa<T, scitbx::matrix::packed_[ul]_accessor> to flex array
scitbx::constantsGeneral purpose mathematical or physical constants
scitbx::fftpackFast Fourier Transformations based on FFTPACK
scitbx::lbfgsLimited-memory Broyden-Fletcher-Goldfarb-Shanno (LBFGS) minimizer
scitbx::lbfgsbC++ port of L-BFGS-B Version 2.1
scitbx::lbfgsb::rawC++ port of the raw FORTRAN interface of L-BFGS-B Version 2.1
scitbx::mathMath utilities
scitbx::math::accumulatorAccumulators to compute partial series. Statistics are the main application
scitbx::math::besselFamily of Bessel functions
scitbx::math::erf_constantsPort of http://www.netlib.org/specfun/erf (as of 2003 Dec 03)
scitbx::math::gammaThe Gamma function and some of his/her friends
scitbx::math::gaussianTools for the handling of Gaussians: a Exp[-b x^2]
scitbx::math::r3_rotationAlgorithms for R3 (i.e. 3-dimensional space) rotation matrices
scitbx::matrix::tensor_rank_2Computations involving tensors of rank 2
scitbx::minpackC++ port of files in MINPACK
scitbx::minpack::rawRaw MINPACK interfaces with minimal adjustments
scitbx::randomEasy access to Boost.Random
scitbx::rigid_bodyRigid-body algorithms (main reference: see essence/featherstone.py)
scitbx::rigid_body::array_packingArray packing and unpacking, mainly to aid Python interfaces
scitbx::rigid_body::body_libBody models and associated utilities
scitbx::rigid_body::featherstoneSee essence/featherstone.py
scitbx::rigid_body::joint_libSee essence/joint_lib.py
scitbx::rigid_body::spatial_libSee essence/spatial_lib.py
scitbx::rigid_body::tardySee essence/tardy.py
smtbxCommon smtbx namespace
smtbx::refinementRefinement namespace

Generated on Thu Jun 19 15:34:55 2014 for cctbx by  doxygen 1.5.6