mmtbx.find_peaks
index
/net/chevy/raid1/nat/src/cctbx_project/mmtbx/find_peaks.py

 
Modules
       
cctbx.array_family.flex
libtbx
cctbx.maptbx
mmtbx.refinement.print_statistics
sys

 
Classes
       
__builtin__.object
manager
peaks_holder

 
class manager(__builtin__.object)
     Methods defined here:
__init__(self, fmodel, map_type, map_cutoff, params=None, log=None, use_kick_map=False, kick_map_params=None, use_all_data=True, silent=False, map_coeffs=None, update_f_part1=True)
peaks(self)
peaks_mapped(self)
show_mapped(self, pdb_atoms)

Data descriptors defined here:
__dict__
dictionary for instance variables (if defined)
__weakref__
list of weak references to the object (if defined)

 
class peaks_holder(__builtin__.object)
     Methods defined here:
__init__(self, heights, sites, iseqs_of_closest_atoms=None)
filter_by_secondary_map(self, map, min_value)
sort(self, reverse=False)

Data descriptors defined here:
__dict__
dictionary for instance variables (if defined)
__weakref__
list of weak references to the object (if defined)

 
Functions
       
show_highest_peaks_and_deepest_holes(fmodel, pdb_atoms, map_type, map_cutoff_plus, map_cutoff_minus, log=None)

 
Data
        division = _Feature((2, 2, 0, 'alpha', 2), (3, 0, 0, 'alpha', 0), 8192)
master_params = <libtbx.phil.scope object>
peak_search_params_str = '\npeak_search_level = 1\n .type=int\nmax_peaks = 0...d for fast neighbor search\n .expert_level=2\n'