mmtbx.rotamer
index
/net/chevy/raid1/nat/src/cctbx_project/mmtbx/rotamer/__init__.py

 
Package Contents
       
graphics
n_dim_table
ramachandran_eval
rotamer_eval
sidechain_angles
tst_geostd_vs_sidechain_angles_props
tst_rotamer_eval

 
Functions
       
exercise()
extract_phi_psi(pdb_hierarchy, atom_selection=None)
get_omega_atoms(prev_atoms, atoms)
get_phi_psi_atoms(prev_res, residue, next_res)
get_phi_psi_indices(prev_res, residue, next_res)
improper_cnab_from_atoms(thisC, thisN, thisCA, thisCB)
improper_ncab_from_atoms(thisN, thisC, thisCA, thisCB)
is_cis_peptide(prev_atoms, atoms)
omega_from_atoms(prevCA, prevC, thisN, thisCA)
phi_from_atoms(prevC, resN, resCA, resC)
phi_from_sites(prevC, resN, resCA, resC)
phi_psi_from_sites(i_seqs, sites_cart)
psi_from_atoms(resN, resCA, resC, nextN)
psi_from_sites(resN, resCA, resC, nextN)

 
Data
        division = _Feature((2, 2, 0, 'alpha', 2), (3, 0, 0, 'alpha', 0), 8192)