mmtbx.xmanip
index
/net/chevy/raid1/nat/src/cctbx_project/mmtbx/xmanip.py

 
Modules
       
cctbx.adptbx
cctbx.crystal
iotbx.crystal_symmetry_from_any
cctbx.array_family.flex
iotbx
scitbx.matrix
os
iotbx.reflection_file_reader
iotbx.reflection_file_utils
cctbx.sgtbx
sys
mmtbx.xmanip_tasks

 
Classes
       
__builtin__.object
quick_rt_mx

 
class quick_rt_mx(__builtin__.object)
     Methods defined here:
__init__(self, r=[1, 0, 0, 0, 1, 0, 0, 0, 1], t=(0, 0, 0))
inverse(self)
r(self)
show(self, out=None)
t(self)

Data descriptors defined here:
__dict__
dictionary for instance variables (if defined)
__weakref__
list of weak references to the object (if defined)

Data and other attributes defined here:
matrix = <module 'scitbx.matrix' from '/net/chevy/raid1/nat/src/cctbx_project/scitbx/matrix/__init__.pyc'>

 
Functions
       
StringIO(...)
StringIO([s]) -- Return a StringIO-like stream for reading or writing
chain_name_modifier(chain_id, increment)
construct_output_labels(labels, label_appendix, out=None)
print_help(command_name)
read_data(file_name, labels, xs, log=None)
run(args, command_name='phenix.xmanip')
write_as_pdb_file(input_xray_structure=None, input_crystal_symmetry=None, input_pdb=None, out=None, chain_id_increment=5, additional_remark=None, print_cryst_and_scale=True)

 
Data
        division = _Feature((2, 2, 0, 'alpha', 2), (3, 0, 0, 'alpha', 0), 8192)
master_params = <libtbx.phil.scope object>