rstbx.dps_core
index
/net/chevy/raid1/nat/src/cctbx_project/rstbx/dps_core/__init__.py

 
Package Contents
       
basis_choice
cell_assessment
constrainment
lepage
sampling
tst_iotbx_converter
zuoreduction

 
Classes
       
cctbx_orientation_ext.crystal_orientation(Boost.Python.instance)
Orientation

 
class Orientation(cctbx_orientation_ext.crystal_orientation)
    
Method resolution order:
Orientation
cctbx_orientation_ext.crystal_orientation
Boost.Python.instance
__builtin__.object

Methods defined here:
__init__(self, either_matrix, basis_type_flag=True)

Methods inherited from cctbx_orientation_ext.crystal_orientation:
__copy__(self)
__eq__(self, other)
__getattr__(self, tag)
__getinitargs__(self)
__reduce__ = (...)
__str__(self)
best_similarity_transformation(...)
best_similarity_transformation( (crystal_orientation)arg1, (crystal_orientation)other, (float)fractional_length_tolerance, (int)unimodular_generator_range) -> tuple :
 
    C++ signature :
        scitbx::mat3<double> best_similarity_transformation(cctbx::crystal_orientation {lvalue},cctbx::crystal_orientation,double,int)
change_basis(...)
change_basis( (crystal_orientation)arg1, (change_of_basis_op)arg2) -> crystal_orientation :
 
    C++ signature :
        cctbx::crystal_orientation change_basis(cctbx::crystal_orientation {lvalue},cctbx::sgtbx::change_of_basis_op)
 
change_basis( (crystal_orientation)arg1, (object)arg2) -> crystal_orientation :
 
    C++ signature :
        cctbx::crystal_orientation change_basis(cctbx::crystal_orientation {lvalue},scitbx::mat3<double>)
constrain(self, constraints)
crystal_rotation_matrix(self)
difference_Z_score(...)
difference_Z_score( (crystal_orientation)arg1, (crystal_orientation)other) -> float :
 
    C++ signature :
        double difference_Z_score(cctbx::crystal_orientation {lvalue},cctbx::crystal_orientation)
direct_matrix(...)
direct_matrix( (crystal_orientation)arg1) -> tuple :
 
    C++ signature :
        scitbx::mat3<double> direct_matrix(cctbx::crystal_orientation {lvalue})
direct_mean_square_difference(...)
direct_mean_square_difference( (crystal_orientation)arg1, (crystal_orientation)other) -> float :
 
    C++ signature :
        double direct_mean_square_difference(cctbx::crystal_orientation {lvalue},cctbx::crystal_orientation)
make_positive(self)
reciprocal_matrix(...)
reciprocal_matrix( (crystal_orientation)arg1) -> tuple :
 
    C++ signature :
        scitbx::mat3<double> reciprocal_matrix(cctbx::crystal_orientation {lvalue})
reduced_cell(self)
rotate_thru(...)
rotate_thru( (crystal_orientation)arg1, (object)unit_axis, (float)angle) -> crystal_orientation :
 
    C++ signature :
        cctbx::crystal_orientation rotate_thru(cctbx::crystal_orientation {lvalue},scitbx::vec3<double>,double)
set_new_crystal_rotation_matrix(self, mat3)
unit_cell(...)
unit_cell( (crystal_orientation)arg1) -> unit_cell :
 
    C++ signature :
        cctbx::uctbx::unit_cell unit_cell(cctbx::crystal_orientation {lvalue})
unit_cell_inverse(...)
unit_cell_inverse( (crystal_orientation)arg1) -> unit_cell :
 
    C++ signature :
        cctbx::uctbx::unit_cell unit_cell_inverse(cctbx::crystal_orientation {lvalue})

Data and other attributes inherited from cctbx_orientation_ext.crystal_orientation:
__instance_size__ = 88
__safe_for_unpickling__ = True

Data descriptors inherited from Boost.Python.instance:
__dict__
__weakref__

Data and other attributes inherited from Boost.Python.instance:
__new__ = <built-in method __new__ of Boost.Python.class object>
T.__new__(S, ...) -> a new object with type S, a subtype of T

 
Functions
       
combocmp(a, b)
directional_show(direction, message)
foo(...)
foo() -> tuple :
 
    C++ signature :
        boost::python::tuple foo()
full_sphere_indices(...)
full_sphere_indices( (unit_cell)unit_cell, (float)resolution_limit, (space_group)space_group) -> miller_index :
 
    C++ signature :
        scitbx::af::shared<cctbx::miller::index<int> > full_sphere_indices(cctbx::uctbx::unit_cell,double,cctbx::sgtbx::space_group)

 
Data
        ENTER1 = rstbx_ext.SpotClass.ENTER1
ENTER2 = rstbx_ext.SpotClass.ENTER2
EXIT3 = rstbx_ext.SpotClass.EXIT3
EXIT4 = rstbx_ext.SpotClass.EXIT4
FULL_ENTER = rstbx_ext.SpotClass.FULL_ENTER
FULL_EXIT = rstbx_ext.SpotClass.FULL_EXIT
GOOD = rstbx_ext.SpotClass.GOOD
ICE = rstbx_ext.SpotClass.ICE
NONE = rstbx_ext.SpotClass.NONE
OTHERIMAGE = rstbx_ext.SpotClass.OTHERIMAGE
OUTLIER = rstbx_ext.SpotClass.OUTLIER
OVERLAP = rstbx_ext.SpotClass.OVERLAP
SPINDLE = rstbx_ext.SpotClass.SPINDLE
division = _Feature((2, 2, 0, 'alpha', 2), (3, 0, 0, 'alpha', 0), 8192)