Class Hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

• alignment_t
  • revolute_alignment
  • six_dof_alignment
    • translational_alignment
  • spherical_alignment
  • zero_dof_alignment
• angle
• angle_proxy
• approx_equal
• asu
• asu_cache
• asu_clusters
• asu_mapping
• asu_mapping_index
• asu_mapping_index_pair
  • asu_mapping_index_pair_and_diff
  • bond_asu_proxy
  • nonbonded_asu_proxy
• asu_mappings
• atom
• atom_data
• atom_group
• atom_group_data
• atom_label_columns_formatter
• atom_mask
• auto_array
• axis_and_angle_from_matrix
• base
• base< 4 >
  • it1992
• base< 5 >
  • wk1995
• basic_statistics
• batch
• bidiagonal_2x2_decomposition
• bidiagonal_decomposition
• bidiagonalisation
• body_t
  • revolute
  • six_dof
  • spherical
  • translational
  • zero_dof
• bond_params
  • bond
  • bond_asu_proxy
  • bond_simple_proxy
  • bond_sym_proxy
• bond_similarity
• bond_similarity_proxy
• brick
• brick_point
• cartesian
• chain
• chain_data
• change_of_basis_op
• characteristic
• characteristic_iterator
• chebyshev_base
  • chebyshev_fitter
  • chebyshev_polynome
  • chebyshev_smooth
  • chebyshev_smooth_fitter
• chebyshev_lsq
• chebyshev_smooth_lsq
• chirality
• chirality_proxy
• column
• columns_73_76_evaluator
• common_results
  • maximum_likelihood_criterion
  • maximum_likelihood_criterion_hl
• complex_group
• complex_to_complex_3d
• conformer
• conformer_data
• const_ref
  • scitbx::af::ref
    • ref_owning_shared
    • ref_owning_versa
    • ref1
    • ref2
• const_ref1
• const_ref1
• constraints
• continued_fraction
• core
  • base< FloatType, ExpI2PiFunctor, smtbx::structure_factors::direct::one_scatterer_one_h_linearisation::in_generic_space_group< FloatType, ExpI2PiFunctor, compute_grad > >
  • base< FloatType, ExpI2PiFunctor, smtbx::structure_factors::direct::one_scatterer_one_h_linearisation::in_origin_centric_space_group< FloatType, ExpI2PiFunctor, compute_grad > >
  • base
    • in_generic_space_group
    • in_origin_centric_space_group
• core
• cos_repulsion_function
• crystal
• crystal_orientation
• cut
• data_group
  • observations_group
• data_group< double >
• dataset
• demmel_kahan_rotations
• depth_first_search
• dihedral
• dihedral_proxy
• direct_space_asu
• dps_core
• drop_convergence_test
• eigensystem
• ellipsoid_to_sphere_transform
• end_of_line
• erf_engine
• error
  • error_improper_input_data
  • error_improper_input_parameter
  • error_internal_error
  • error_line_search_failed
    • error_line_search_failed_rounding_errors
  • error_search_direction_not_descent
• error_base
  • error
    • error_index
    • error_non_crystallographic_rotation_matrix_encountered
    • error_rational_vector
    • error_degenerate_unit_cell_parameters
    • error_iteration_limit_exceeded
    • error_index
  • error
    • error_index
  • error
    • error_index
  • error
    • error_index
  • error
    • error_index
  • error
• ewald_sphere_base_model
  • rotation_angles
• exception
  • error_base< cctbx::error >
  • error_base< gltbx::error >
  • error_base< iotbx::error >
  • error_base< mmtbx::error >
  • error_base< scitbx::error >
• expand_to_p1_complex
• expand_to_p1_hendrickson_lattman
• expand_to_p1_obs
• expand_to_p1_phases
• expand_to_p1_scalar
• f_calc_modulus
• f_calc_modulus_square
• f_sq_as_f_xtal_3_7
• factor_beta_u_iso
• factor_u_cart_u_iso
• factor_u_cif_u_iso
• factor_u_star_u_iso
• factorization
  • complex_to_complex
  • real_to_complex
• failure_info
• fast_less_than
• fast_minimum_reduction
• fast_nv1995
• fast_terms
• few_scatterer_constraints
• find_affine
• float_asu
• float_cut_plane
• floating_point_epsilon
• fortran_int
  • sticky_fortran_int
• fortran_int_parser
• fortran_int_parser
• fortran_real
  • sticky_fortran_real
• fortran_real_parser
• fortran_real_parser
• fp_fdp
• fractional
• from_map
• functor_absolute
• functor_approx_equal
• functor_fmod_positive
• functor_pow2
• gaussian_repulsion_function
• geometrical_hydrogens
  • acetylenic_CH
  • aromatic_CH_or_amide_NH
  • polyhedral_BH
  • secondary_CH2
  • staggered_terminal_tetrahedral_XHn
  • terminal_tetrahedral_XHn
  • terminal_trihedral_XH2
  • tertiary_CH
• geometrical_hydrogens< smtbx::refinement::constraints::acetylenic_CH< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::tiny< ElementType, N >, 1, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::aromatic_CH_or_amide_NH< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::tiny< ElementType, N >, 1, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::polyhedral_BH< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::tiny< ElementType, N >, 1, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::secondary_CH2< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::tiny< ElementType, N >, 2, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::staggered_terminal_tetrahedral_XHn< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::small< ElementType, N >, 3, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::terminal_tetrahedral_XHn< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::small< ElementType, N >, 3, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::terminal_trihedral_XH2< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::tiny< ElementType, N >, 2, SharedArray1D >
• geometrical_hydrogens< smtbx::refinement::constraints::tertiary_CH< FloatType, XrayScattererType, SharedArray1D >, FloatType, XrayScattererType, scitbx::af::tiny< ElementType, N >, 1, SharedArray1D >
• gilbert_peierls_lu_factorization
• gill_murray_wright_decomposition_in_place
• golay_24_12_generator
• hexagonal_sampling_generator
• histogram
• hr_ht_cache
• hr_ht_cache< float_type >
• hr_ht_group
• icosahedron
• image_divider
• imaginary
• imaginary_unit_t
• incremental_d_star_sq
• index_generator
• info
• initialiser
• input
• input_atom_labels
• inverse_power_repulsion_function
• is_singular_revolute
• isotropic_form_factor_mixin
• isotropic_form_factor_mixin< cctbx::eltbx::xray_scattering::gaussian >
• it1992_iterator
• joint_t
  • revolute
  • six_dof
  • spherical
  • translational
  • zero_dof
• l_l_transpose_decomposition_in_place
• least_squares_residual
• levenberg_marquardt
• line_info
• lmder
• local_scaling_nikonov
• lq_decomposition
• machine_dependent_base
• many_scatterer_constraints
• mapping
• mass_points_cache
• matrix
• median_functor
• median_statistics
• mersenne_twister
• min_sym_equiv_distance_info
• minimizer
• minimizer
• model
• model_data
• neutron_news_1992_table
• neutron_news_1992_table_iterator
• node
• non_parametric_bootstrap
• non_parametric_bootstrap_as_int
• nonbonded
• nonbonded_params
• nonbonded_simple_proxy
• norm_accumulator
• normal_equations_for_generic_residuals
• normal_equations_for_linear_least_squares
• normal_equations_separating_scale_factor
• numeric_limits
• object
• optional_copy
• packed_l_accessor
• packed_u_accessor
• pair_asu_table
• pairwise_global
• parameter_indices
• parameter_map
• parse_string
• phase_info
• phase_integrator
• planarity
• planarity_proxy
• position
• principal_axes_of_inertia
• principal_axes_of_inertia_2d
• product
• prolsq_repulsion_function
• prototype
  • proto_cylinder
  • proto_ellipsoid
• python_file_buffer
• qr_decomposition
• random_gauss_adaptor
• random_matrix_generator
• range_loop
• real_symmetric
• real_to_complex_3d
• reference_asu
• reflection
• remainder_and_quotient
• residue
• residue_data
• residue_group
• residue_group_data
• root
• root_data
• rot_mx
• rot_mx_info
• rotation
• rt_mx
  • rt_mx_from_string
• scatterer
• search_symmetry
• search_symmetry_flags
  • symmetry_flags
• shell_asu_tables_actions
• simple_pair_generator
  • fast_pair_generator
• site_constraints
• site_symmetry_ops
  • site_symmetry
• smooth_bootstrap
• solve_in_place
• sorted_asu_proxies
  • bond_sorted_asu_proxies
  • nonbonded_sorted_asu_proxies
• sorted_asu_proxies< cctbx::geometry_restraints::bond_simple_proxy, cctbx::geometry_restraints::bond_asu_proxy >
• sorted_asu_proxies< cctbx::geometry_restraints::nonbonded_simple_proxy, cctbx::geometry_restraints::nonbonded_asu_proxy >
• space_group
• space_group_symbol_iterator
• space_group_symbols
• space_group_type
• sphere_3d
  • minimum_covering_sphere_3d
• ss_vec_mod
• statistics
  • more_statistics
• structure_seminvariants
• sum
• sum< double >
• sym_equiv_index
  • asym_index
  • index_table_layout_adaptor
• sym_equiv_indices
• sym_equiv_sites
• symmetry
• system_model
  • model
• table
• table
• table
• table
• table
• table
• table_entry
• table_iterator
• table_iterator
• table_iterator
• table_iterator
• table_iterator
• term
• term_table_actions
• three_shells
• tiny_plain
  • hendrickson_lattman
  • grid_symop
  • scitbx::af::tiny
    • index_span
    • hkl_columns
  • mat2
  • mat3
  • sym_mat2
  • sym_mat3
  • vec2
  • vec3
    • index
  • vec3< IntType >
    • grid_point
• to_map
• tr_vec
  • tr_vec_12
• traditional_convergence_test
• translation_part_info
• triangulation
• triplet_generator
• triplet_phase_relation
  • weighted_triplet_phase_relation
• u_transpose_u_decomposition_in_place
• unit_cell
• vector
• vector::const_iterator
• vector::element_const_reference
• vector::element_reference
• vector::iterator
• wk1995_iterator