import iotbx.pdb import sys def run(args): if (len(args) == 0): raise RuntimeError("Please specify one or more pdb file names.") for file_name in args: pdb_obj = iotbx.pdb.hierarchy.input(file_name=file_name) pdb_obj.hierarchy.overall_counts().show() if (__name__ == "__main__"): run(sys.argv[1:])